Depth-specific distribution of the SAR116 phages revealed by virome binning

Ilnam Kang, Jang Cheon Cho

Research output: Contribution to journalArticlepeer-review

5 Scopus citations

Abstract

HMO-2011, a recently isolated lytic phage that infects the SAR116 bacterial clade, represents one of the most abundant phage types in the oceans. In this study, the HMO-2011 genome sequence was compared with virome sequences obtained from various depths of the Pacific Ocean regions using metagenome binning. HMO-2011 was confirmed to be one of the most highly assigned viruses, with a maximum of 7.6% of total reads assigned. The HMO-2011-type phages demonstrated a depth-specific distribution, showing more abundance in the euphotic zone of coastal, transition, and open ocean regions as compared with the dark ocean.

Original languageEnglish
Pages (from-to)592-596
Number of pages5
JournalJournal of Microbiology and Biotechnology
Volume24
Issue number5
DOIs
StatePublished - 2014

Keywords

  • "Candidatus puniceispirillum marinum
  • HMO-2011
  • Marine virus
  • Metagenome binning
  • Sar116
  • Strain IMCC1322
  • Viral metagenome

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